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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs5751792 chr22:24401542 G/A GSTT1 chr22:24376133-24384680:- 0.86 7.73 3.46E-10 Box Plot
ACC rs5751792 chr22:24401542 G/A LOC391322 chr22:24373117-24374043:+ 0.81 6.95 5.99E-9 Box Plot
ACC rs5760107 chr22:24252597 T/C GSTT1 chr22:24376133-24384680:- 0.74 6.27 7.17E-8 Box Plot
ACC rs5760107 chr22:24252597 T/C LOC391322 chr22:24373117-24374043:+ 0.71 5.87 3.12E-7 Box Plot
ACC rs5760108 chr22:24252668 G/T GSTT1 chr22:24376133-24384680:- 0.68 5.78 4.22E-7 Box Plot
ACC rs5760108 chr22:24252668 G/T LOC391322 chr22:24373117-24374043:+ 0.64 5.24 2.93E-6 Box Plot
ACC rs5760109 chr22:24252938 C/G GSTT1 chr22:24376133-24384680:- 0.73 6.24 8.14E-8 Box Plot
ACC rs5760109 chr22:24252938 C/G LOC391322 chr22:24373117-24374043:+ 0.7 5.84 3.45E-7 Box Plot
ACC rs5760176 chr22:24402321 A/G GSTT2 chr22:24322249-24326106:+ 0.5 5.61 7.9E-7 Box Plot
ACC rs579013 chr1:245202420 C/T EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs5792183 chr11:60161528 T/TA MS4A14 chr11:60146003-60185229:+ 0.37 5.44 1.44E-6 Box Plot
ACC rs57966166 chr7:76037190 C/G UPK3B chr7:76139745-76145838:+ 0.7 5.31 2.28E-6 Box Plot
ACC rs57979737 chr8:71599323 T/TC XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs58024711 chr7:72234732 G/C TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs58127265 chr8:71667707 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot